HomeMolecular BiologyEnzyme Catalysis Dynamics

Enzyme Kinetics Simulator

Interactive enzyme catalysis simulator: watch substrate molecules diffuse, bind an enzyme's active site and convert to product, with substrate concentration, temperature, competitive inhibitor and enzyme count tunable to explore Michaelis-Menten kinetics in real time.

Molecular Biology3DModerate60 FPS
biotech-topic-43 ↗ Open standalone

Enzymes are biological catalysts: proteins whose active sites bind a specific substrate, lower the energy barrier of a reaction and release the product, ready to repeat the cycle millions of times. This simulator visualizes that catalytic cycle directly — substrate molecules diffuse through a cell-like volume, bind an enzyme's active site on contact, are held for a brief catalytic delay, then convert to product and release the site. Adjust substrate concentration, temperature, a competing inhibitor and the number of active sites to see how each reshapes the reaction rate, and watch the simulated rate trace out the same saturating curve described by the Michaelis–Menten equation.

⚙ Under the hood

Watch substrate molecules diffuse, bind an enzyme's active site and convert to product in real time, and explore how substrate concentration, temperature, a competitive inhibitor and enzyme count reshape Michaelis-Menten reaction kinetics.

Three.jsbiologybiochemistryenzymeskineticsmolecular biology

3D · Three.js / WebGL renderer · 60 FPS target · runs fully client-side, no install

What did you find?

Add reproduction steps (optional)