🧬 Genomics & Bioinformatics Pipelines

Genome AssemblyNewSimulate shotgun sequencing where reads are shredded from a genome, randomly positioned with… Genome AssemblyNewExplore de Bruijn graph assembly by chopping reads into k-mers, creating nodes for… Similarity Network Fusion: Multi-Omics Patient SubtypingNewFuse genomic, transcriptomic and proteomic patient-similarity networks with the Similarity… Copy Number Variant Read-Depth DetectorNewSimulate whole-genome sequencing read-depth data across a chromosome and detect copy-number… Multi-Omics Data Integration DashboardNewIntegration of genomic, transcriptomic, and proteomic data into a unified disease model. Whole Genome Sequencing Variant Calling PipelineNewA pipeline for variant calling from raw sequencing reads (FASTQ to VCF). Polygenic Risk Score Disease PredictionNewCalculation of polygenic risk scores for multifactorial diseases. GWAS Manhattan Plot Association ExplorerNewAn interactive Manhattan plot for exploring genetic associations with diseases using GWAS… Long-Read Nanopore Sequencing Base-CallingNewReal-time base calling of signals from nanopore sequencing reads.