🧬 Genomics & Bioinformatics Pipelines

Precision Medicine: Genomic ProfilingNew📱Walks through how genomic profiling - variant calling, biomarker matching and… Similarity Network Fusion 2D: Multi-Omics Patient SubtypingNew📱A 2D matrix-and-graph view of Similarity Network Fusion (SNF): watch per-layer… Copy Number Variant Read-Depth DetectorNew📱Simulate whole-genome sequencing read-depth data across a chromosome and detect copy-number… Genome AssemblyNew📱Simulate shotgun sequencing where reads are shredded from a genome, randomly positioned with… Genome AssemblyNew📱Explore de Bruijn graph assembly by chopping reads into k-mers, creating nodes for… Similarity Network Fusion: Multi-Omics Patient SubtypingNew📱Fuse genomic, transcriptomic and proteomic patient-similarity networks with the Similarity… Copy Number Variant Read-Depth DetectorNew📱Simulate whole-genome sequencing read-depth data across a chromosome and detect copy-number… Multi-Omics Data Integration DashboardNew📱Integration of genomic, transcriptomic, and proteomic data into a unified disease model. Whole Genome Sequencing Variant Calling PipelineNew📱A pipeline for variant calling from raw sequencing reads (FASTQ to VCF). Polygenic Risk Score Disease PredictionNew📱Calculation of polygenic risk scores for multifactorial diseases. GWAS Manhattan Plot Association ExplorerNew📱An interactive Manhattan plot for exploring genetic associations with diseases using GWAS… Long-Read Nanopore Sequencing Base-CallingNew📱Real-time base calling of signals from nanopore sequencing reads.