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🧪 Chemistry Biochemistry Simulation

Interactive 3D biochemistry simulation of enzyme catalysis: substrate molecules bind an enzyme's active site and convert to product following Michaelis-Menten kinetics. Tune substrate concentration, Km, Vmax and a competitive inhibitor and watch the reaction rate curve build live.

Chemistry & Materials2DModerate60 FPS📱 Mobile-adapted
chemistry-biochemistry-simulation ↗ Open standalone

This simulation puts Michaelis-Menten enzyme kinetics inside a living 3D reaction chamber. Substrate molecules diffuse freely until they encounter a free active site on one of the enzyme molecules, bind briefly to form an enzyme-substrate complex, and are released as product after a turnover delay — the same E + S ⇌ ES → E + P mechanism that governs real catalysis inside every living cell, from digestive enzymes to the machinery of metabolism. Adjust substrate concentration, enzyme count, binding affinity (Km) and turnover rate (kcat) to see the classic Michaelis-Menten rate curve build itself in real time, or switch on a competitive inhibitor to watch it raise the apparent Km while Vmax stays fixed — the textbook kinetic fingerprint biochemists use to classify how a drug or toxin blocks an enzyme.

⚙ Under the hood

This simulation explores the intersection of chemistry and biochemistry, allowing users to investigate biochemical reactions and processes in a dynamic environment.

Biochemistry Simulation

2D · HTML5 Canvas 2D · 60 FPS target · runs fully client-side, no install

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