HomeMedicine & BiophysicsAntibody-Drug Conjugate: Linker Cleavage & Bystander Effect

Antibody-Drug Conjugate: Linker Cleavage & Bystander Effect

Interactive 3D simulation of antibody-drug conjugate (ADC) pharmacology: ADCs bind antigen-positive tumor cells, internalize, and release cytotoxic payload — compare cleavable linkers (membrane-permeable payload, bystander killing of antigen-negative neighbors) against non-cleavable linkers (killing confined to the target cell).

Medicine & Biophysics3DModerate60 FPS📱 Mobile-adapted⇄ 2D version
antibody-drug-conjugate-targeting ↗ Open standalone

Antibody-drug conjugates pair a tumor-targeting antibody with a potent cytotoxic payload, and the linker chemistry connecting them decides whether killing stays confined to the antigen-positive cell an ADC binds or spreads to neighboring cells. This simulation renders a 3D field of antigen-positive tumor cells and antigen-negative bystander cells with free ADC molecules diffusing through the extracellular space, binding surface antigen, internalizing, and releasing payload according to the linker you select. A cleavable linker frees a membrane-permeable payload that diffuses into and kills neighboring cells regardless of their own antigen status — the bystander effect used by drugs like trastuzumab deruxtecan — while a non-cleavable linker keeps the cytotoxic effect confined to the cell that internalized the ADC, as with T-DM1. Adjust antigen density, drug-antibody ratio and diffusion radius and watch the live kill counts for target versus bystander cells.

⚙ Under the hood

Interactive 3D simulation of antibody-drug conjugate (ADC) pharmacology: watch ADCs bind antigen-positive tumor cells, internalize, and release payload, then compare how cleavable versus non-cleavable linkers determine whether killing spreads to antigen-negative bystander cells.

antibody-drug-conjugateoncologypharmacologylinker-chemistrybystander-effectcell-targeting

3D · Three.js / WebGL renderer · 60 FPS target · runs fully client-side, no install

What did you find?

Add reproduction steps (optional)