HomeBiomarker Discovery ProteomicsThermal Proteome Profiling: Drug Target Melt-Shift Simulator

Thermal Proteome Profiling: Drug Target Melt-Shift Simulator

Interactive 3D thermal proteome profiling (CETSA/TPP) simulator: heat-challenge a target protein population and an off-target control, add a ligand at variable concentration and affinity, and watch soluble-fraction melt curves and the apparent Tm shift that reveals real drug targets.

Biomarker Discovery Proteomics3DAdvanced60 FPS
biology-ext-topic-50 ↗ Open standalone

Thermal proteome profiling heats a protein population, removes whatever aggregates by centrifugation, and reads out the soluble fraction left behind — the same read-out mass spectrometry captures at proteome scale. This simulator renders a target protein population and an unrelated off-target control side by side as instanced 3D spheres, each carrying its own randomly offset melting threshold so the group denatures along a real sigmoidal curve rather than all at once. Add a ligand at a chosen concentration and binding affinity and watch the target's apparent melting temperature shift upward via a saturating Langmuir isotherm, while the control — which the drug does not bind — stays put, exactly the specificity signature that identifies a genuine drug target in a real TPP/CETSA screen.

⚙ Under the hood

Heat-challenge a target protein population and an off-target control side by side, add a ligand at variable concentration and binding affinity, and watch the soluble-fraction melt curves and apparent Tm shift that reveal a real drug target in a thermal proteome profiling (TPP/CETSA) assay.

proteomicsmass spectrometrydrug discoveryprotein foldingbiomarkerCETSA

3D · Three.js / WebGL renderer · 60 FPS target · runs fully client-side, no install

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