Antibiotic ResistanceNewBacteria evolve resistance under antibiotic selection: susceptible cells die above their MIC…
Phage–Bacteria CoevolutionNewBacteriophage and bacteria populations coevolve matching-allele resistance and infectivity…
Virus Lytic CycleNewA cellular automaton of host cells and diffusing virions: attachment, eclipse period,…
Biofilm FormationNewSimulate how bacteria aggregate, communicate via quorum sensing and form protective biofilms.
CRISPR-Cas9 Genome EditingAnimate CRISPR-Cas9: guide RNA scans DNA, PAM recognition, double-strand cleavage, and NHEJ…
Bacterial Colony & ChemotaxisLay down a nutrient gradient and watch bacteria run and tumble their way up it, forming…
Bacteria CompetitionNewSimulate competing bacterial colonies vying for nutrients on a petri dish using growth and…
Bacterial Growth Curve: Lag, Log, Stationary & DeathNewA real, running Monod-kinetics simulation of bacterial population growth: lag, exponential,…
Virus Entry: Receptor Binding & Membrane FusionNewSimulate how a virus enters a host cell — spike-protein/receptor binding specificity, then…
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