🩹 Wound Healing — Cell Migration

Collective cell migration closes a wound. Leading edge cells extend lamellipodia driven by actin polymerization. A Fisher-KPP-like front advances at velocity v = 2√(Dm·k).

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Watch cells (pink) migrate to close the wound gap · P pause · R reset

How it Works

The simulation uses a 2D grid where each cell contains a density value u(x,y,t) representing the local cell density (0 = empty wound, 1 = fully confluent). The Fisher-KPP equation is solved numerically: diffusion spreads cells into the wound, while logistic growth refills the monolayer.

Individual cell particles are rendered at the leading edge to visualize the active migration front. Lamellipodia protrusions are drawn as small extending arms on edge cells. The front position is tracked over time and compared to the theoretical Fisher-KPP wave speed v = 2√(D·k).

Fisher-KPP: ∂u/∂t = D·∇²u + k·u·(1 - u)
Wave speed: v = 2√(D·k)
Lamellipodia: actin polymerization rate ∝ (1 - u)·motility
Gap area(t) = ∫∫ [u(x,y,t) < 0.5] dx dy
Wound closure % = 1 - Gap(t)/Gap(0)

Frequently Asked Questions

What is collective cell migration?

Collective cell migration is the coordinated movement of groups of cells rather than individual cells. It is essential for wound healing, embryonic development, and cancer invasion. Cells maintain cell-cell contacts while moving as a cohesive sheet.

What are lamellipodia?

Lamellipodia are flat, sheet-like protrusions at the leading edge of migrating cells, driven by branched actin polymerization. They sense the environment, adhere to the substrate, and generate the traction forces needed for cell movement.

What is the Fisher-KPP equation?

The Fisher-KPP equation ∂u/∂t = D·∂²u/∂x² + ku(1-u) describes a traveling wave front where u is cell density, D is motility, and k is proliferation rate. The wave speed approaches v = 2√(Dk), predicting wound closure rate.

What drives cells to move into a wound?

Multiple signals drive wound-directed migration: free edge detection (loss of contact inhibition), chemoattractants (EGF, FGF), electrotaxis (wound electric fields), and mechanical signals transmitted through the epithelial sheet via cadherins.

What is contact inhibition of locomotion?

Contact inhibition of locomotion (CIL) is the phenomenon where migrating cells stop and change direction upon contact with another cell. It prevents cells from migrating over one another and coordinates collective directional movement toward the wound.

What is the role of actin in cell migration?

Actin polymerization at the leading edge pushes the cell membrane forward. Myosin II contraction at the rear retracts the cell body. Focal adhesions anchor actin to the substrate, transmitting forces that propel the cell forward.

What are the phases of wound healing?

Wound healing has four overlapping phases: hemostasis (blood clotting), inflammation (immune cell recruitment), proliferation (cell migration, collagen deposition, angiogenesis), and remodeling (matrix reorganization over months to years).

How does the scratch assay measure cell migration?

The scratch assay (wound healing assay) creates a cell-free gap in a confluent monolayer using a pipette tip. Time-lapse microscopy tracks how quickly cells close the gap. This simple method measures motility and is widely used in cancer research.

How do growth factors affect wound healing?

Growth factors such as EGF, PDGF, TGF-β, and VEGF are released at wound sites. They stimulate cell proliferation, migration, and angiogenesis. Topical growth factor therapies are used clinically to accelerate healing of chronic wounds.

What happens in impaired wound healing?

Impaired wound healing occurs in diabetes, venous insufficiency, and immunosuppression. High glucose levels impair cell migration and angiogenesis. Chronic wounds become stuck in the inflammatory phase, leading to non-healing ulcers.

About this simulation

A 160×84 grid holds a cell-density value at every point and is updated every frame with the Fisher-KPP equation ∂u/∂t = D∇²u + ku(1−u), diffusing cells sideways into the wound while logistic growth refills the sheet behind the front. The dashed red line tracks the measured front position against the theoretical wave speed v=2√(Dk), so picking a growth-factor boost lets you watch the real EGF/FGF acceleration effect play out in the live front-position chart.

🔬 What it shows

A pink cell monolayer advancing into a dark wound gap, with small lamellipodia protrusions animated at the leading edge and a scrolling chart comparing measured front position to Fisher-KPP theory.

🎮 How to use

Adjust Cell Motility D, Proliferation k, Wound Width and Noise, pick a Growth factor boost preset, then compare Front speed to the theoretical KPP value; press P/R to pause/reset.

💡 Did you know?

The scratch assay this simulation mimics is one of the cheapest, most widely used experiments in cancer biology labs — researchers literally scratch a pipette tip through a dish of cells and time-lapse how fast the gap closes.

Frequently asked questions

How closely does the measured Front speed match the KPP prediction?

The code separately computes an empirical speed from how far the front moved between frames and a theoretical kppSpeed = 2*sqrt(Deff*keff), letting you directly compare simulated behaviour to Fisher-KPP wave theory in the stats panel.

What does the Growth factor boost dropdown change?

Selecting EGF or EGF+FGF multiplies both effective motility Deff and proliferation keff by the chosen factor (2x or 4x), simulating how real growth factors accelerate both cell movement and division simultaneously.

Why do the small lines at the leading edge wiggle around?

They represent lamellipodia protrusions, redrawn each frame with a randomly perturbed angle to mimic the exploratory, fluctuating actin-driven extensions real migrating cells put out at their front edge.

Why does increasing Noise make the wound edge look ragged?

The update step adds a random perturbation term scaled by noise*u*(1-u) to the density field, introducing local irregularities that roughen what would otherwise be a smooth advancing front.

Why does a narrower Wound Width close faster?

A smaller wound sets fewer empty grid columns for the diffusive front to cross, so even at the same motility and proliferation rates the gap percentage statistic reaches zero sooner.